Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC002056.1-201ENST00000395613 760 ntBASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC211486.1-202ENST00000416371 468 ntBASIC14.47□□□□□ -0.09
SNX18Q96RF0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC211476.1-201ENST00000503899 468 ntBASIC14.47□□□□□ -0.09
SNX18Q96RF0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC073389.1-201ENST00000595595 795 ntBASIC14.47□□□□□ -0.09
SNX18Q96RF0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 PDPK2P-202ENST00000562415 1191 ntBASIC14.46□□□□□ -0.09
SNX18Q96RF0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 AC092865.6-201ENST00000642101 219 ntBASIC14.46□□□□□ -0.09
SNX18Q96RF0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
SNX18Q96RF0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SNX18Q96RF0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SNX18Q96RF0 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 AC067930.6-201ENST00000623257 4947 ntBASIC14.46□□□□□ -0.1
SNX18Q96RF0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
SNX18Q96RF0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms