Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm2213-201ENSMUST00000197485 688 ntBASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup35Q8R4R6 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.37□□□□□ -0.75
Nup35Q8R4R6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm14701-201ENSMUST00000117156 348 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm16202-201ENSMUST00000117532 544 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm43514-201ENSMUST00000198852 424 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.36□□□□□ -0.75
Nup35Q8R4R6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup35Q8R4R6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gm14350-201ENSMUST00000116642 640 ntBASIC10.35□□□□□ -0.75
Nup35Q8R4R6 Gm15371-201ENSMUST00000117057 784 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms