Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm16505-201ENSMUST00000179981 232 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Rps4l-202ENSMUST00000204242 789 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pif1Q80SX8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.83□□□□□ -0.52
Pif1Q80SX8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm14017-201ENSMUST00000121934 386 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm22121-201ENSMUST00000175148 54 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm3786-201ENSMUST00000202659 378 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.82□□□□□ -0.52
Pif1Q80SX8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Pif1Q80SX8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Snord83b-201ENSMUST00000104546 94 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm13183-201ENSMUST00000118615 789 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.81□□□□□ -0.52
Pif1Q80SX8 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms