Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm16372-201ENSMUST00000073088 450 ntBASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Mir339-201ENSMUST00000083659 96 ntBASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Krt39Q6IFX4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Gm7653-201ENSMUST00000214567 508 ntBASIC14.05□□□□□ -0.16
Krt39Q6IFX4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.05□□□□□ -0.16
Krt39Q6IFX4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm5745-201ENSMUST00000183748 313 ntBASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm27701-201ENSMUST00000184498 110 ntBASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm45384-201ENSMUST00000210451 277 ntBASIC14.04□□□□□ -0.16
Krt39Q6IFX4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Krt39Q6IFX4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Krt39Q6IFX4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms