Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col12a1Q60847 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gm9135-201ENSMUST00000182963 990 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Mir6941-201ENSMUST00000184711 59 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.24□□□□□ -0.45
Col12a1Q60847 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col12a1Q60847 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.24□□□□□ -0.45
Col12a1Q60847 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm24934-201ENSMUST00000103764 111 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm23255-201ENSMUST00000102244 110 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm12712-201ENSMUST00000120676 801 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm3551-201ENSMUST00000190750 664 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm43912-201ENSMUST00000204352 538 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Col12a1Q60847 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col12a1Q60847 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.23□□□□□ -0.45
Col12a1Q60847 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm11663-201ENSMUST00000117888 290 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm5870-201ENSMUST00000196461 282 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm25766-201ENSMUST00000104101 131 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Gm7722-201ENSMUST00000120646 741 ntBASIC12.22□□□□□ -0.45
Col12a1Q60847 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.22□□□□□ -0.45
Col12a1Q60847 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms