Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC232323.1-201ENST00000540724 2099 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 REXO1L5P-201ENST00000622260 2098 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 LAGE3P1-201ENST00000425356 484 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 DUSP5P1-201ENST00000441325 1139 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 EMBP1-201ENST00000458200 901 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC021097.1-201ENST00000607902 574 ntBASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
FAM78BQ5VT40 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC090616.6-203ENST00000579186 1945 ntBASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 OR7E14P-202ENST00000530490 1290 ntBASIC12.61□□□□□ -0.39
FAM78BQ5VT40 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC107918.4-202ENST00000641623 219 ntBASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 AC105250.1-201ENST00000509378 2057 ntBASIC12.61□□□□□ -0.39
FAM78BQ5VT40 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
FAM78BQ5VT40 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms