Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.45□□□□□ -0.26
Shmt1P50431 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.45□□□□□ -0.26
Shmt1P50431 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Shmt1P50431 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Shmt1P50431 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.44□□□□□ -0.26
Shmt1P50431 Gm13736-201ENSMUST00000119272 253 ntBASIC13.44□□□□□ -0.26
Shmt1P50431 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.44□□□□□ -0.26
Shmt1P50431 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.44□□□□□ -0.26
Shmt1P50431 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.44□□□□□ -0.26
Shmt1P50431 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.44□□□□□ -0.26
Shmt1P50431 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shmt1P50431 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Shmt1P50431 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Shmt1P50431 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shmt1P50431 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.43□□□□□ -0.26
Shmt1P50431 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Shmt1P50431 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.43□□□□□ -0.26
Shmt1P50431 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.43□□□□□ -0.26
Shmt1P50431 Gm44405-201ENSMUST00000198952 126 ntBASIC13.43□□□□□ -0.26
Shmt1P50431 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.43□□□□□ -0.26
Shmt1P50431 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Shmt1P50431 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Shmt1P50431 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shmt1P50431 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms