Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.56□□□□□ -0.72
Nkx2-1P50220 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gm4875-201ENSMUST00000118257 786 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gm12485-201ENSMUST00000119641 291 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.55□□□□□ -0.72
Nkx2-1P50220 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nkx2-1P50220 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.54□□□□□ -0.72
Nkx2-1P50220 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.54□□□□□ -0.72
Nkx2-1P50220 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Mir7684-201ENSMUST00000183858 60 ntBASIC10.54□□□□□ -0.72
Nkx2-1P50220 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.54□□□□□ -0.72
Nkx2-1P50220 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.54□□□□□ -0.72
Nkx2-1P50220 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nkx2-1P50220 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms