Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm19163-201ENSMUST00000223313 780 ntBASIC12.19□□□□□ -0.46
P04213 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.19□□□□□ -0.46
P04213 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
P04213 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.19□□□□□ -0.46
P04213 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.19□□□□□ -0.46
P04213 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P04213 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04213 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P04213 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P04213 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
P04213 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.18□□□□□ -0.46
P04213 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.18□□□□□ -0.46
P04213 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.18□□□□□ -0.46
P04213 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.18□□□□□ -0.46
P04213 Gm14760-201ENSMUST00000121831 999 ntBASIC12.18□□□□□ -0.46
P04213 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
P04213 Gm44124-201ENSMUST00000204159 472 ntBASIC12.18□□□□□ -0.46
P04213 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.18□□□□□ -0.46
P04213 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.18□□□□□ -0.46
P04213 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.18□□□□□ -0.46
P04213 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.18□□□□□ -0.46
P04213 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.18□□□□□ -0.46
P04213 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P04213 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P04213 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.18□□□□□ -0.46
P04213 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P04213 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04213 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
P04213 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
P04213 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
P04213 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.17□□□□□ -0.46
P04213 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.17□□□□□ -0.46
P04213 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.17□□□□□ -0.46
P04213 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.17□□□□□ -0.46
P04213 Gm38092-201ENSMUST00000195600 653 ntBASIC12.17□□□□□ -0.46
P04213 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.17□□□□□ -0.46
P04213 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.17□□□□□ -0.46
P04213 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.17□□□□□ -0.46
P04213 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04213 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms