Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Gm44980-201ENSMUST00000205826 314 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ubr1O70481 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ubr1O70481 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.2■□□□□ 0.18
Ubr1O70481 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.2■□□□□ 0.18
Ubr1O70481 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.19■□□□□ 0.18
Ubr1O70481 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC16.19■□□□□ 0.18
Ubr1O70481 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Ubr1O70481 Gm8100-201ENSMUST00000182906 988 ntBASIC16.19■□□□□ 0.18
Ubr1O70481 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.19■□□□□ 0.18
Ubr1O70481 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ubr1O70481 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ubr1O70481 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ubr1O70481 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm22144-201ENSMUST00000157402 102 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm8956-201ENSMUST00000203939 825 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm26448-201ENSMUST00000082446 203 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.18■□□□□ 0.18
Ubr1O70481 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ubr1O70481 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.18■□□□□ 0.18
Ubr1O70481 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ubr1O70481 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ubr1O70481 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Gm13461-201ENSMUST00000120980 662 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.18■□□□□ 0.18
Ubr1O70481 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Gm18711-201ENSMUST00000199341 750 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 Gm44882-201ENSMUST00000205702 802 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.18■□□□□ 0.18
Ubr1O70481 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ubr1O70481 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ubr1O70481 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ubr1O70481 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Gm10152-201ENSMUST00000193475 1344 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ubr1O70481 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.17■□□□□ 0.18
Ubr1O70481 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ubr1O70481 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.17■□□□□ 0.18
Ubr1O70481 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms