Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb4Q91XZ6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb4Q91XZ6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Gm12091-201ENSMUST00000146791 830 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Gm8463-201ENSMUST00000208573 613 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb4Q91XZ6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm14928-201ENSMUST00000120198 477 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm6458-201ENSMUST00000211573 635 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.68□□□□□ -0.38
Pcdhb4Q91XZ6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms