Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.82□□□□□ -0.36
RxrbP28704 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.82□□□□□ -0.36
RxrbP28704 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RxrbP28704 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RxrbP28704 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.81□□□□□ -0.36
RxrbP28704 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
RxrbP28704 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.81□□□□□ -0.36
RxrbP28704 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.81□□□□□ -0.36
RxrbP28704 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.81□□□□□ -0.36
RxrbP28704 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RxrbP28704 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RxrbP28704 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.81□□□□□ -0.36
RxrbP28704 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.81□□□□□ -0.36
RxrbP28704 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.81□□□□□ -0.36
RxrbP28704 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RxrbP28704 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RxrbP28704 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RxrbP28704 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RxrbP28704 Gm22189-201ENSMUST00000103822 86 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Gm15321-201ENSMUST00000121290 288 ntBASIC12.8□□□□□ -0.36
RxrbP28704 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Gm42550-201ENSMUST00000201553 960 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.8□□□□□ -0.36
RxrbP28704 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Gm19220-201ENSMUST00000222682 803 ntBASIC12.8□□□□□ -0.36
RxrbP28704 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RxrbP28704 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Syt7-204ENSMUST00000223586 1344 ntBASIC12.8□□□□□ -0.36
RxrbP28704 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RxrbP28704 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.79□□□□□ -0.36
RxrbP28704 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.79□□□□□ -0.36
RxrbP28704 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Gm12291-201ENSMUST00000121627 311 ntBASIC12.79□□□□□ -0.36
RxrbP28704 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.79□□□□□ -0.36
RxrbP28704 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.79□□□□□ -0.36
RxrbP28704 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RxrbP28704 Gm38223-201ENSMUST00000194484 695 ntBASIC12.79□□□□□ -0.36
RxrbP28704 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms