Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RXRBP28702 AC138466.3-201ENST00000619983 221 ntBASIC20.18■□□□□ 0.82
RXRBP28702 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RXRBP28702 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RXRBP28702 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RXRBP28702 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RXRBP28702 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RXRBP28702 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RXRBP28702 KRT8P21-201ENST00000430398 1491 ntBASIC20.18■□□□□ 0.82
RXRBP28702 AP000974.1-201ENST00000623909 2387 ntBASIC20.17■□□□□ 0.82
RXRBP28702 AC093503.3-201ENST00000624917 2352 ntBASIC20.17■□□□□ 0.82
RXRBP28702 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RXRBP28702 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 IL9RP3-201ENST00000442856 1674 ntBASIC20.17■□□□□ 0.82
RXRBP28702 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 AL645937.2-201ENST00000396808 931 ntBASIC20.17■□□□□ 0.82
RXRBP28702 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.17■□□□□ 0.82
RXRBP28702 AC023141.7-201ENST00000430646 407 ntBASIC20.17■□□□□ 0.82
RXRBP28702 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.17■□□□□ 0.82
RXRBP28702 AP000358.1-201ENST00000456260 156 ntBASIC20.17■□□□□ 0.82
RXRBP28702 NDUFS6P1-201ENST00000485187 316 ntBASIC20.17■□□□□ 0.82
RXRBP28702 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.17■□□□□ 0.82
RXRBP28702 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC20.17■□□□□ 0.82
RXRBP28702 AL358472.3-201ENST00000608147 415 ntBASIC20.17■□□□□ 0.82
RXRBP28702 AC021016.3-201ENST00000608367 477 ntBASIC20.17■□□□□ 0.82
RXRBP28702 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RXRBP28702 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RXRBP28702 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RXRBP28702 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RXRBP28702 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RXRBP28702 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RXRBP28702 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RXRBP28702 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 AL583805.1-201ENST00000391389 531 ntBASIC20.16■□□□□ 0.82
RXRBP28702 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.16■□□□□ 0.82
RXRBP28702 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 AQP7P5-201ENST00000428759 1049 ntBASIC20.16■□□□□ 0.82
RXRBP28702 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.16■□□□□ 0.82
RXRBP28702 AL645933.1-201ENST00000440087 609 ntBASIC20.16■□□□□ 0.82
RXRBP28702 AQP7P4-201ENST00000447083 1042 ntBASIC20.16■□□□□ 0.82
RXRBP28702 AQP7P2-201ENST00000453967 1041 ntBASIC20.16■□□□□ 0.82
RXRBP28702 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.16■□□□□ 0.82
RXRBP28702 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC20.16■□□□□ 0.82
RXRBP28702 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.16■□□□□ 0.82
RXRBP28702 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 AC055811.3-201ENST00000584952 686 ntBASIC20.16■□□□□ 0.82
RXRBP28702 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 PEBP1P2-201ENST00000603980 558 ntBASIC20.16■□□□□ 0.82
RXRBP28702 AL139339.2-201ENST00000608063 657 ntBASIC20.16■□□□□ 0.82
RXRBP28702 AQP7P3-201ENST00000624547 1041 ntBASIC20.16■□□□□ 0.82
RXRBP28702 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 ENPP7P8-202ENST00000527856 1345 ntBASIC20.16■□□□□ 0.82
RXRBP28702 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
RXRBP28702 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RXRBP28702 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.16■□□□□ 0.82
RXRBP28702 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 AL603756.1-201ENST00000606511 2163 ntBASIC20.15■□□□□ 0.82
RXRBP28702 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.15■□□□□ 0.82
RXRBP28702 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RXRBP28702 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RXRBP28702 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms