Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.39□□□□□ -0.59
H3f3aP84244 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.39□□□□□ -0.59
H3f3aP84244 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.39□□□□□ -0.59
H3f3aP84244 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
H3f3aP84244 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
H3f3aP84244 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.39□□□□□ -0.59
H3f3aP84244 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
H3f3aP84244 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
H3f3aP84244 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
H3f3aP84244 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
H3f3aP84244 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.38□□□□□ -0.59
H3f3aP84244 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm16379-201ENSMUST00000161469 348 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.38□□□□□ -0.59
H3f3aP84244 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm6222-202ENSMUST00000182143 629 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
H3f3aP84244 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm37424-201ENSMUST00000191727 561 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Gm8762-201ENSMUST00000193486 339 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Gm38092-201ENSMUST00000195600 653 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
H3f3aP84244 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.38□□□□□ -0.59
H3f3aP84244 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H3f3aP84244 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H3f3aP84244 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.37□□□□□ -0.59
H3f3aP84244 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
H3f3aP84244 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.37□□□□□ -0.59
H3f3aP84244 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.37□□□□□ -0.59
H3f3aP84244 Gm5187-201ENSMUST00000117317 991 ntBASIC11.37□□□□□ -0.59
H3f3aP84244 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
H3f3aP84244 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
H3f3aP84244 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.37□□□□□ -0.59
H3f3aP84244 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 Gm18584-201ENSMUST00000203098 964 ntBASIC11.37□□□□□ -0.59
H3f3aP84244 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.37□□□□□ -0.59
H3f3aP84244 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.37□□□□□ -0.59
H3f3aP84244 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms