Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Rps28P62858 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 AC121574.1-201ENSMUST00000228770 3132 ntBASIC7.34□□□□□ -1.23
Rps28P62858 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Rps28P62858 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Rps28P62858 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gm42778-201ENSMUST00000199644 553 ntBASIC7.34□□□□□ -1.23
Rps28P62858 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Rps28P62858 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC7.34□□□□□ -1.23
Rps28P62858 AC140293.1-201ENSMUST00000225626 1247 ntBASIC7.34□□□□□ -1.23
Rps28P62858 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC7.34□□□□□ -1.23
Rps28P62858 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Gm37264-201ENSMUST00000194916 2192 ntBASIC7.34□□□□□ -1.23
Rps28P62858 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Rps28P62858 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Rps28P62858 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Rps28P62858 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Rps28P62858 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Rps28P62858 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Rps28P62858 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Rps28P62858 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.24
Rps28P62858 AC124397.2-201ENSMUST00000225575 2215 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 AC139350.1-201ENSMUST00000227064 1594 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Sfi1-201ENSMUST00000066391 3898 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Gm42602-201ENSMUST00000200288 3224 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Gm43307-201ENSMUST00000199465 2371 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Gm29685-201ENSMUST00000219670 2365 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC7.33□□□□□ -1.24
Rps28P62858 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Rps28P62858 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Nln-205ENSMUST00000224945 2486 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Zcchc12-201ENSMUST00000048067 2089 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC7.33□□□□□ -1.24
Rps28P62858 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC7.33□□□□□ -1.24
Rps28P62858 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Rps28P62858 Mir7221-201ENSMUST00000184009 72 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC7.33□□□□□ -1.24
Rps28P62858 Gm29707-201ENSMUST00000196325 491 ntBASIC7.33□□□□□ -1.24
Rps28P62858 Gm42501-201ENSMUST00000200220 1026 ntBASIC7.33□□□□□ -1.24
Rps28P62858 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms