Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Mmp3P28862 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp3P28862 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.65□□□□□ -0.22
Mmp3P28862 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Mmp3P28862 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Mmp3P28862 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.65□□□□□ -0.22
Mmp3P28862 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.65□□□□□ -0.22
Mmp3P28862 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Mmp3P28862 Gm14130-201ENSMUST00000118417 987 ntBASIC13.65□□□□□ -0.22
Mmp3P28862 Gm11597-201ENSMUST00000121423 964 ntBASIC13.65□□□□□ -0.22
Mmp3P28862 Gm24845-201ENSMUST00000158034 109 ntBASIC13.65□□□□□ -0.22
Mmp3P28862 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.65□□□□□ -0.22
Mmp3P28862 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.65□□□□□ -0.22
Mmp3P28862 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Mmp3P28862 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.65□□□□□ -0.22
Mmp3P28862 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Mmp3P28862 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp3P28862 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Mmp3P28862 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Mmp3P28862 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Mmp3P28862 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gm14832-201ENSMUST00000121289 322 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Mir3102-201ENSMUST00000175555 104 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 Gm2260-201ENSMUST00000184965 657 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.64□□□□□ -0.23
Mmp3P28862 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.64□□□□□ -0.23
Mmp3P28862 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Mmp3P28862 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.64□□□□□ -0.23
Mmp3P28862 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Mmp3P28862 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp3P28862 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.63□□□□□ -0.23
Mmp3P28862 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Mmp3P28862 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Mmp3P28862 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Mmp3P28862 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms