Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.4■□□□□ 0.54
CTNND1O60716 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTNND1O60716 AC046158.3-201ENST00000624947 2558 ntBASIC18.39■□□□□ 0.54
CTNND1O60716 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CTNND1O60716 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.39■□□□□ 0.54
CTNND1O60716 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNND1O60716 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 AC026954.1-201ENST00000429771 1293 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 C2orf27AP3-201ENST00000434123 579 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.39■□□□□ 0.53
CTNND1O60716 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.39■□□□□ 0.53
CTNND1O60716 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.39■□□□□ 0.53
CTNND1O60716 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.39■□□□□ 0.53
CTNND1O60716 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 AC010328.2-201ENST00000597698 1111 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 AL354718.3-201ENST00000616414 581 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 CR382287.1-201ENST00000623954 586 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CTNND1O60716 AC011477.6-201ENST00000604980 1927 ntBASIC18.39■□□□□ 0.53
CTNND1O60716 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTNND1O60716 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTNND1O60716 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CTNND1O60716 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 CNN2P8-201ENST00000421872 913 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 PFN1P12-201ENST00000455938 534 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 AC108725.1-201ENST00000495472 409 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.38■□□□□ 0.53
CTNND1O60716 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 DUX4L45-201ENST00000566406 1057 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 AC015910.1-201ENST00000579400 975 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 AC107373.2-201ENST00000607735 490 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 AC008687.7-202ENST00000637404 953 ntBASIC18.38■□□□□ 0.53
CTNND1O60716 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CTNND1O60716 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.38■□□□□ 0.53
CTNND1O60716 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.38■□□□□ 0.53
CTNND1O60716 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTNND1O60716 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTNND1O60716 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.37■□□□□ 0.53
CTNND1O60716 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
CTNND1O60716 AGGF1P2-201ENST00000426656 2106 ntBASIC18.37■□□□□ 0.53
CTNND1O60716 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTNND1O60716 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms