Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm16177-201ENSMUST00000120728 718 ntBASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm45784-201ENSMUST00000188360 142 ntBASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm40466-201ENSMUST00000212174 422 ntBASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn13Q9Z0S4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Gm4271-201ENSMUST00000174444 973 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 AY702102-202ENSMUST00000194651 1173 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Gm37922-201ENSMUST00000195596 455 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Gm43818-201ENSMUST00000200605 466 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn13Q9Z0S4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gm13123-201ENSMUST00000122173 492 ntBASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cldn13Q9Z0S4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms