Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC098850.1-201ENST00000419919 790 ntBASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AC093726.1-201ENST00000608064 963 ntBASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 AC011477.6-201ENST00000604980 1927 ntBASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCN4BQ8IWT1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC136604.1-201ENST00000418535 575 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 KRT17P7-201ENST00000451704 1104 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 RN7SL752P-201ENST00000463779 287 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC104596.2-201ENST00000512793 793 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC097359.3-201ENST00000603982 1210 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC099568.2-201ENST00000609194 695 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 MIR8072-201ENST00000614241 80 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC069224.1-201ENST00000566372 1715 ntBASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCN4BQ8IWT1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC098614.1-201ENST00000368528 745 ntBASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 SLED1-202ENST00000512051 380 ntBASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 CTBP2P3-201ENST00000585629 1255 ntBASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 AL158212.4-201ENST00000624062 1286 ntBASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 CU639417.3-201ENST00000624240 1404 ntBASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SCN4BQ8IWT1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 4116.4 ms