Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm14350-201ENSMUST00000116642 640 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Mir6956-201ENSMUST00000183598 62 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm27838-201ENSMUST00000184829 128 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gm44872-201ENSMUST00000207864 420 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Lysmd4Q8CC84 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm13689-201ENSMUST00000119360 685 ntBASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Mir8102-201ENSMUST00000184148 139 ntBASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm29667-201ENSMUST00000190817 490 ntBASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm9797-201ENSMUST00000052902 613 ntBASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lysmd4Q8CC84 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.46□□□□□ -0.58
Lysmd4Q8CC84 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.45□□□□□ -0.58
Lysmd4Q8CC84 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms