Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Prrxl1-205ENSMUST00000228878 723 ntBASIC14.1□□□□□ -0.15
Brca1P48754 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.1□□□□□ -0.15
Brca1P48754 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Brca1P48754 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Brca1P48754 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Brca1P48754 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.09□□□□□ -0.15
Brca1P48754 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.09□□□□□ -0.15
Brca1P48754 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.09□□□□□ -0.15
Brca1P48754 Gm5733-201ENSMUST00000190232 939 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Gm9132-201ENSMUST00000210182 832 ntBASIC14.09□□□□□ -0.15
Brca1P48754 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.09□□□□□ -0.15
Brca1P48754 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Brca1P48754 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Brca1P48754 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Brca1P48754 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Brca1P48754 Gm26286-201ENSMUST00000104166 134 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Brca1P48754 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brca1P48754 Gm16166-201ENSMUST00000118291 787 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.08□□□□□ -0.15
Brca1P48754 Gm17889-201ENSMUST00000198410 598 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Gm6867-201ENSMUST00000219165 425 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.08□□□□□ -0.15
Brca1P48754 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brca1P48754 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brca1P48754 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Brca1P48754 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Brca1P48754 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.08□□□□□ -0.16
Brca1P48754 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Brca1P48754 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.08□□□□□ -0.16
Brca1P48754 Gm23771-201ENSMUST00000178702 110 ntBASIC14.08□□□□□ -0.16
Brca1P48754 Mir6998-201ENSMUST00000183343 64 ntBASIC14.08□□□□□ -0.16
Brca1P48754 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC14.08□□□□□ -0.16
Brca1P48754 Gm10288-201ENSMUST00000084614 537 ntBASIC14.08□□□□□ -0.16
Brca1P48754 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Brca1P48754 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Brca1P48754 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Brca1P48754 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Brca1P48754 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms