Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFC4P35249 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC4P35249 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC4P35249 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 ALOX12P2-203ENST00000570921 1945 ntBASIC19.69■□□□□ 0.74
RFC4P35249 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RFC4P35249 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 ACTBP8-201ENST00000403258 1108 ntBASIC19.69■□□□□ 0.74
RFC4P35249 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 CNN2P10-201ENST00000443067 918 ntBASIC19.69■□□□□ 0.74
RFC4P35249 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 AC126915.1-201ENST00000522847 1038 ntBASIC19.69■□□□□ 0.74
RFC4P35249 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.69■□□□□ 0.74
RFC4P35249 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 MIR3619-201ENST00000579667 83 ntBASIC19.69■□□□□ 0.74
RFC4P35249 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 NDUFV2P1-201ENST00000596415 907 ntBASIC19.69■□□□□ 0.74
RFC4P35249 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RFC4P35249 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.69■□□□□ 0.74
RFC4P35249 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RFC4P35249 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.68■□□□□ 0.74
RFC4P35249 ME2P1-201ENST00000426028 1970 ntBASIC19.68■□□□□ 0.74
RFC4P35249 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RFC4P35249 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC4P35249 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RFC4P35249 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC4P35249 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC4P35249 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.68■□□□□ 0.74
RFC4P35249 KLF2P2-201ENST00000416807 1039 ntBASIC19.68■□□□□ 0.74
RFC4P35249 HINT2P1-201ENST00000419438 481 ntBASIC19.68■□□□□ 0.74
RFC4P35249 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.68■□□□□ 0.74
RFC4P35249 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.68■□□□□ 0.74
RFC4P35249 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 RN7SL769P-201ENST00000469386 295 ntBASIC19.68■□□□□ 0.74
RFC4P35249 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.68■□□□□ 0.74
RFC4P35249 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.68■□□□□ 0.74
RFC4P35249 MIR6727-201ENST00000620702 65 ntBASIC19.68■□□□□ 0.74
RFC4P35249 AC138627.1-207ENST00000641560 1006 ntBASIC19.68■□□□□ 0.74
RFC4P35249 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RFC4P35249 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RFC4P35249 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RFC4P35249 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RFC4P35249 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC4P35249 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC4P35249 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
RFC4P35249 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 FXNP2-201ENST00000411625 547 ntBASIC19.67■□□□□ 0.74
RFC4P35249 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC4P35249 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RFC4P35249 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC4P35249 AC114812.1-204ENST00000449669 728 ntBASIC19.67■□□□□ 0.74
RFC4P35249 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RFC4P35249 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RFC4P35249 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RFC4P35249 RN7SL48P-201ENST00000579283 293 ntBASIC19.67■□□□□ 0.74
RFC4P35249 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RFC4P35249 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC4P35249 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms