Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm19184-201ENSMUST00000196798 928 ntBASIC14.38□□□□□ -0.11
Stx1aO35526 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.38□□□□□ -0.11
Stx1aO35526 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Stx1aO35526 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Stx1aO35526 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Stx1aO35526 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.37□□□□□ -0.11
Stx1aO35526 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Stx1aO35526 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Stx1aO35526 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Gm12151-201ENSMUST00000121374 290 ntBASIC14.37□□□□□ -0.11
Stx1aO35526 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Gm37935-201ENSMUST00000192012 982 ntBASIC14.37□□□□□ -0.11
Stx1aO35526 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.37□□□□□ -0.11
Stx1aO35526 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.37□□□□□ -0.11
Stx1aO35526 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.37□□□□□ -0.11
Stx1aO35526 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Stx1aO35526 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Stx1aO35526 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.37□□□□□ -0.11
Stx1aO35526 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Stx1aO35526 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.36□□□□□ -0.11
Stx1aO35526 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Stx1aO35526 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm5687-201ENSMUST00000118252 640 ntBASIC14.36□□□□□ -0.11
Stx1aO35526 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm6983-201ENSMUST00000214912 628 ntBASIC14.36□□□□□ -0.11
Stx1aO35526 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Itm2b-204ENSMUST00000228637 783 ntBASIC14.36□□□□□ -0.11
Stx1aO35526 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Stx1aO35526 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Stx1aO35526 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Stx1aO35526 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Stx1aO35526 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 503.2 ms