Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Gm13689-201ENSMUST00000119360 685 ntBASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Pcdh1F7BJK1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Pcdh1F7BJK1 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm22189-201ENSMUST00000103822 86 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm9630-201ENSMUST00000178304 885 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm28760-201ENSMUST00000185995 736 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Gm10576-201ENSMUST00000191927 825 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh1F7BJK1 Syt7-204ENSMUST00000223586 1344 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms