Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AC036164.1-201ENST00000570544 333 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 CTBP2P3-201ENST00000585629 1255 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 MIR8072-201ENST00000614241 80 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 AL607033.1-201ENST00000623900 1599 ntBASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC00588Q9Y4M8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 INE1-201ENST00000456273 945 ntBASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 RN7SL399P-201ENST00000471648 279 ntBASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC097359.3-201ENST00000603982 1210 ntBASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 TMEM261P1-201ENST00000604899 340 ntBASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 AC084018.2-201ENST00000613093 2607 ntBASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LINC00588Q9Y4M8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC00588Q9Y4M8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms