Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH9Q9ULB4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.71■□□□□ 0.26
CDH9Q9ULB4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.71■□□□□ 0.26
CDH9Q9ULB4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 KRT18P43-201ENST00000469825 1281 ntBASIC16.7■□□□□ 0.26
CDH9Q9ULB4 ELK1P1-201ENST00000485699 580 ntBASIC16.7■□□□□ 0.26
CDH9Q9ULB4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 MIR8072-201ENST00000614241 80 ntBASIC16.7■□□□□ 0.26
CDH9Q9ULB4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 DOC2GP-204ENST00000639052 2548 ntBASIC16.7■□□□□ 0.26
CDH9Q9ULB4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDH9Q9ULB4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 AP006294.1-201ENST00000415407 339 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 NME2P1-201ENST00000426182 414 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 FAM86LP-201ENST00000478302 853 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 CR383656.12-201ENST00000549567 513 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 AL121723.1-201ENST00000445194 1519 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 CU639417.3-201ENST00000624240 1404 ntBASIC16.69■□□□□ 0.26
CDH9Q9ULB4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH9Q9ULB4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH9Q9ULB4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms