Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm5187-201ENSMUST00000117317 991 ntBASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tlr3Q99MB1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Tlr3Q99MB1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tlr3Q99MB1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tlr3Q99MB1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm22121-201ENSMUST00000175148 54 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Gm9257-201ENSMUST00000221254 232 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Mir339-201ENSMUST00000083659 96 ntBASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tlr3Q99MB1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Gm14921-201ENSMUST00000118643 908 ntBASIC13.76□□□□□ -0.21
Tlr3Q99MB1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms