Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Gm15653-201ENSMUST00000119247 907 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Gm12428-201ENSMUST00000119844 727 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Gm15467-201ENSMUST00000120582 445 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Mir6990-201ENSMUST00000183724 91 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm18206-201ENSMUST00000207027 926 ntBASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Smco3Q8BQM7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Smco3Q8BQM7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms