Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC93Q567U6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC93Q567U6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC93Q567U6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 BTBD6P1-201ENST00000412176 1267 ntBASIC19.36■□□□□ 0.69
CCDC93Q567U6 AC136604.1-201ENST00000418535 575 ntBASIC19.36■□□□□ 0.69
CCDC93Q567U6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 PHKG1P2-201ENST00000457537 863 ntBASIC19.36■□□□□ 0.69
CCDC93Q567U6 KRT18P43-201ENST00000469825 1281 ntBASIC19.36■□□□□ 0.69
CCDC93Q567U6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.36■□□□□ 0.69
CCDC93Q567U6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC93Q567U6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC93Q567U6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 FAM197Y7-201ENST00000432892 766 ntBASIC19.35■□□□□ 0.69
CCDC93Q567U6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AL591846.1-201ENST00000451736 433 ntBASIC19.35■□□□□ 0.69
CCDC93Q567U6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AC093813.1-201ENST00000605066 256 ntBASIC19.35■□□□□ 0.69
CCDC93Q567U6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AC138951.2-201ENST00000623455 1161 ntBASIC19.35■□□□□ 0.69
CCDC93Q567U6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC93Q567U6 AL121723.1-201ENST00000445194 1519 ntBASIC19.35■□□□□ 0.69
CCDC93Q567U6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC93Q567U6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 DOC2GP-204ENST00000639052 2548 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AKR7A2P1-201ENST00000460134 915 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC078819.1-201ENST00000547454 765 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC012085.1-201ENST00000548270 765 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 HNRNPUP1-201ENST00000554987 333 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC93Q567U6 AC005695.3-201ENST00000614522 232 ntBASIC19.34■□□□□ 0.69
CCDC93Q567U6 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms