Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm14660-201ENSMUST00000119809 575 ntBASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm27731-201ENSMUST00000185192 107 ntBASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.2□□□□□ -0.46
Slc6a11P31650 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.2□□□□□ -0.46
Slc6a11P31650 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Slc6a11P31650 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm6447-201ENSMUST00000118905 835 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm11524-201ENSMUST00000119349 807 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm27847-201ENSMUST00000183711 107 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm27375-201ENSMUST00000183799 107 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.19□□□□□ -0.46
Slc6a11P31650 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Slc6a11P31650 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.18□□□□□ -0.46
Slc6a11P31650 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Slc6a11P31650 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms