Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.79□□□□□ -0.36
Nckap1P28660 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nckap1P28660 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Nckap1P28660 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nckap1P28660 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nckap1P28660 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.78□□□□□ -0.36
Nckap1P28660 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nckap1P28660 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nckap1P28660 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nckap1P28660 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.78□□□□□ -0.36
Nckap1P28660 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nckap1P28660 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Nckap1P28660 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nckap1P28660 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.77□□□□□ -0.36
Nckap1P28660 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.77□□□□□ -0.36
Nckap1P28660 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.77□□□□□ -0.36
Nckap1P28660 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.77□□□□□ -0.36
Nckap1P28660 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Nckap1P28660 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nckap1P28660 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nckap1P28660 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.77□□□□□ -0.37
Nckap1P28660 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.77□□□□□ -0.37
Nckap1P28660 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.77□□□□□ -0.37
Nckap1P28660 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.77□□□□□ -0.37
Nckap1P28660 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.77□□□□□ -0.37
Nckap1P28660 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nckap1P28660 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nckap1P28660 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.76□□□□□ -0.37
Nckap1P28660 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms