Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm11618-201ENSMUST00000117946 267 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm8598-201ENSMUST00000221184 836 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm12490-201ENSMUST00000120255 560 ntBASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav9n-2A0A0G2JDP3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms