Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.53□□□□□ -0.24
Clp1Q99LI9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clp1Q99LI9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.52□□□□□ -0.25
Clp1Q99LI9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Gm23699-201ENSMUST00000158835 135 ntBASIC13.52□□□□□ -0.25
Clp1Q99LI9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.52□□□□□ -0.25
Clp1Q99LI9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clp1Q99LI9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm13315-201ENSMUST00000120376 991 ntBASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.51□□□□□ -0.25
Clp1Q99LI9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.51□□□□□ -0.25
Clp1Q99LI9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.51□□□□□ -0.25
Clp1Q99LI9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm12314-201ENSMUST00000118104 538 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm12380-201ENSMUST00000119012 544 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm29615-201ENSMUST00000185371 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28224-201ENSMUST00000186078 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm29001-201ENSMUST00000186177 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28292-201ENSMUST00000186593 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28101-201ENSMUST00000187608 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm29076-201ENSMUST00000187689 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28302-201ENSMUST00000187931 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28646-201ENSMUST00000188220 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28205-201ENSMUST00000189177 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm29032-201ENSMUST00000189797 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm28695-201ENSMUST00000190300 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm37448-201ENSMUST00000192795 697 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.5□□□□□ -0.25
Clp1Q99LI9 Gm45770-201ENSMUST00000212105 616 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms