Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gm9555-201ENSMUST00000200908 583 ntBASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col6a6Q8C6K9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm11930-201ENSMUST00000117788 190 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm14704-201ENSMUST00000120300 874 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm12134-201ENSMUST00000122109 520 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Ntng1-201ENSMUST00000051253 327 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm10312-201ENSMUST00000078515 489 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm12291-201ENSMUST00000121627 311 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm44545-201ENSMUST00000208262 746 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col6a6Q8C6K9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm14665-201ENSMUST00000122294 557 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm24845-201ENSMUST00000158034 109 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm38092-201ENSMUST00000195600 653 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm18730-201ENSMUST00000218038 343 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms