Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm16379-201ENSMUST00000161469 348 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm2991-201ENSMUST00000173338 480 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.72□□□□□ -0.69
Col8a2P25318 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 Gm8762-201ENSMUST00000193486 339 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 Gm43758-201ENSMUST00000199500 367 ntBASIC10.72□□□□□ -0.69
Col8a2P25318 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.72□□□□□ -0.69
Col8a2P25318 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Col8a2P25318 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col8a2P25318 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.71□□□□□ -0.69
Col8a2P25318 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.71□□□□□ -0.69
Col8a2P25318 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.71□□□□□ -0.69
Col8a2P25318 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.71□□□□□ -0.69
Col8a2P25318 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.71□□□□□ -0.69
Col8a2P25318 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.71□□□□□ -0.69
Col8a2P25318 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.71□□□□□ -0.69
Col8a2P25318 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.71□□□□□ -0.69
Col8a2P25318 Gm43822-201ENSMUST00000200285 476 ntBASIC10.71□□□□□ -0.69
Col8a2P25318 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Col8a2P25318 Mir339-201ENSMUST00000083659 96 ntBASIC10.71□□□□□ -0.69
Col8a2P25318 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Col8a2P25318 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Col8a2P25318 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Col8a2P25318 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.71□□□□□ -0.7
Col8a2P25318 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Col8a2P25318 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Col8a2P25318 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.7□□□□□ -0.7
Col8a2P25318 Gm13350-201ENSMUST00000120519 479 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.7□□□□□ -0.7
Col8a2P25318 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.7□□□□□ -0.7
Col8a2P25318 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.7□□□□□ -0.7
Col8a2P25318 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.7□□□□□ -0.7
Col8a2P25318 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Col8a2P25318 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.7□□□□□ -0.7
Col8a2P25318 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.7□□□□□ -0.7
Col8a2P25318 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Col8a2P25318 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms