Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Col5a1O88207 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm23119-201ENSMUST00000158610 140 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm45550-201ENSMUST00000209380 946 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm25545-201ENSMUST00000122673 323 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Gm43962-201ENSMUST00000203898 190 ntBASIC11.42□□□□□ -0.58
Col5a1O88207 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Col5a1O88207 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Col5a1O88207 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.42□□□□□ -0.58
Col5a1O88207 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Col5a1O88207 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Col5a1O88207 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Col5a1O88207 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 Gm14999-201ENSMUST00000121039 624 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Gm44958-201ENSMUST00000203734 736 ntBASIC11.41□□□□□ -0.58
Col5a1O88207 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Col5a1O88207 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Col5a1O88207 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col5a1O88207 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.4□□□□□ -0.58
Col5a1O88207 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.4□□□□□ -0.58
Col5a1O88207 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.4□□□□□ -0.58
Col5a1O88207 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col5a1O88207 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Col5a1O88207 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.4□□□□□ -0.58
Col5a1O88207 Gm12015-201ENSMUST00000117065 843 ntBASIC11.4□□□□□ -0.58
Col5a1O88207 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col5a1O88207 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col5a1O88207 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.4□□□□□ -0.58
Col5a1O88207 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Col5a1O88207 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.4□□□□□ -0.58
Col5a1O88207 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Col5a1O88207 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Col5a1O88207 Gm17889-201ENSMUST00000198410 598 ntBASIC11.4□□□□□ -0.58
Col5a1O88207 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms