Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm6963-201ENSMUST00000147879 379 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.18□□□□□ -0.46
SrfQ9JM73 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 CT009711.2-202ENSMUST00000224538 973 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Gzmn-202ENSMUST00000225535 989 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.18□□□□□ -0.46
SrfQ9JM73 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SrfQ9JM73 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm23200-201ENSMUST00000104379 132 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12616-201ENSMUST00000118594 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm14832-201ENSMUST00000121289 322 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm16296-201ENSMUST00000159905 325 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm5070-201ENSMUST00000177599 862 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12624-201ENSMUST00000177615 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12621-201ENSMUST00000177760 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12615-201ENSMUST00000177970 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12622-201ENSMUST00000177975 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12627-201ENSMUST00000178412 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12625-201ENSMUST00000179122 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12614-201ENSMUST00000179586 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm12613-201ENSMUST00000180323 382 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Gm5523-201ENSMUST00000180415 997 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Zmym2-202ENSMUST00000223669 1281 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.17□□□□□ -0.46
SrfQ9JM73 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SrfQ9JM73 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SrfQ9JM73 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms