Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 TTTY23B-201ENST00000442790 549 ntBASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 RRP7BP-205ENST00000566851 833 ntBASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
ATP6V0A1Q93050 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP6V0A1Q93050 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC079776.1-201ENST00000401540 1152 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC136604.1-201ENST00000418535 575 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC112492.5-201ENST00000421897 457 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 TARDBPP1-201ENST00000442013 1203 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 ACA64.2-201ENST00000459014 129 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 KRT17P8-201ENST00000540749 863 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 HNRNPUP1-201ENST00000554987 333 ntBASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
ATP6V0A1Q93050 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 PCDHB19P-201ENST00000570871 2371 ntBASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 RAB43P1-201ENST00000561790 589 ntBASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 RARRES2P5-201ENST00000564013 466 ntBASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 AC106886.1-201ENST00000568660 600 ntBASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms