Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AC018845.2-201ENST00000568326 409 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 MPDU1-223ENST00000582151 728 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 MTDHP5-201ENST00000598980 586 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AC007064.4-201ENST00000637740 555 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AP003680.1-201ENST00000598970 3660 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AL592424.1-201ENST00000563624 1536 ntBASIC14.25□□□□□ -0.13
LRRC28Q86X40 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 CICP23-201ENST00000605013 2741 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 AL359258.3-201ENST00000622910 2331 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 YBX2P1-201ENST00000394192 760 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 DNAJB3-201ENST00000446806 729 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 AC004877.2-201ENST00000623941 599 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 AC010507.1-201ENST00000633895 436 ntBASIC14.24□□□□□ -0.13
LRRC28Q86X40 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC28Q86X40 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
LRRC28Q86X40 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AL365209.1-201ENST00000624418 6473 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 MCCD1P2-201ENST00000423228 335 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.23□□□□□ -0.13
LRRC28Q86X40 MIR3687-2-201ENST00000577708 61 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRRC28Q86X40 AC023141.13-201ENST00000604991 943 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 AC020765.3-201ENST00000613051 740 ntBASIC14.23□□□□□ -0.13
LRRC28Q86X40 MIR3687-1-201ENST00000614492 61 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms