Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm13142-201ENSMUST00000117213 1453 ntBASIC17.26■□□□□ 0.35
Nphp4P59240 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nphp4P59240 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC17.26■□□□□ 0.35
Nphp4P59240 Gm12380-201ENSMUST00000119012 544 ntBASIC17.26■□□□□ 0.35
Nphp4P59240 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC17.26■□□□□ 0.35
Nphp4P59240 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC17.26■□□□□ 0.35
Nphp4P59240 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.26■□□□□ 0.35
Nphp4P59240 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.26■□□□□ 0.35
Nphp4P59240 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Nphp4P59240 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nphp4P59240 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nphp4P59240 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Nphp4P59240 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.25■□□□□ 0.35
Nphp4P59240 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Nphp4P59240 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.25■□□□□ 0.35
Nphp4P59240 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nphp4P59240 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nphp4P59240 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC17.24■□□□□ 0.35
Nphp4P59240 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC17.24■□□□□ 0.35
Nphp4P59240 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.24■□□□□ 0.35
Nphp4P59240 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC17.24■□□□□ 0.35
Nphp4P59240 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Gm12286-201ENSMUST00000119246 1002 ntBASIC17.24■□□□□ 0.35
Nphp4P59240 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC17.24■□□□□ 0.35
Nphp4P59240 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.24■□□□□ 0.35
Nphp4P59240 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Nphp4P59240 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nphp4P59240 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC17.24■□□□□ 0.35
Nphp4P59240 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Gm42863-201ENSMUST00000197875 2958 ntBASIC17.24■□□□□ 0.35
Nphp4P59240 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nphp4P59240 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Gm16481-201ENSMUST00000119074 1227 ntBASIC17.23■□□□□ 0.35
Nphp4P59240 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.23■□□□□ 0.35
Nphp4P59240 Gm43289-201ENSMUST00000200537 1475 ntBASIC17.23■□□□□ 0.35
Nphp4P59240 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nphp4P59240 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
Nphp4P59240 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms