Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NrlP54846 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.72□□□□□ -0.21
NrlP54846 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NrlP54846 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
NrlP54846 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
NrlP54846 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NrlP54846 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.71□□□□□ -0.21
NrlP54846 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.71□□□□□ -0.21
NrlP54846 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.71□□□□□ -0.21
NrlP54846 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
NrlP54846 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.71□□□□□ -0.21
NrlP54846 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.71□□□□□ -0.21
NrlP54846 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Gm3786-201ENSMUST00000202659 378 ntBASIC13.71□□□□□ -0.21
NrlP54846 Rps4l-202ENSMUST00000204242 789 ntBASIC13.71□□□□□ -0.21
NrlP54846 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.71□□□□□ -0.21
NrlP54846 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
NrlP54846 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NrlP54846 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NrlP54846 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.71□□□□□ -0.22
NrlP54846 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.71□□□□□ -0.22
NrlP54846 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NrlP54846 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.7□□□□□ -0.22
NrlP54846 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.7□□□□□ -0.22
NrlP54846 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
NrlP54846 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NrlP54846 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.7□□□□□ -0.22
NrlP54846 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.7□□□□□ -0.22
NrlP54846 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.7□□□□□ -0.22
NrlP54846 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Snord83b-201ENSMUST00000104546 94 ntBASIC13.7□□□□□ -0.22
NrlP54846 Gm14017-201ENSMUST00000121934 386 ntBASIC13.7□□□□□ -0.22
NrlP54846 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gm22121-201ENSMUST00000175148 54 ntBASIC13.7□□□□□ -0.22
NrlP54846 Mir3547-201ENSMUST00000175461 88 ntBASIC13.7□□□□□ -0.22
NrlP54846 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.7□□□□□ -0.22
NrlP54846 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.7□□□□□ -0.22
NrlP54846 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.7□□□□□ -0.22
NrlP54846 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.7□□□□□ -0.22
NrlP54846 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.7□□□□□ -0.22
NrlP54846 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NrlP54846 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NrlP54846 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NrlP54846 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NrlP54846 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms