Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
Ubr1O70481 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.38■□□□□ 0.21
Ubr1O70481 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.38■□□□□ 0.21
Ubr1O70481 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ubr1O70481 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.38■□□□□ 0.21
Ubr1O70481 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC16.38■□□□□ 0.21
Ubr1O70481 Gm9550-201ENSMUST00000161130 862 ntBASIC16.38■□□□□ 0.21
Ubr1O70481 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.38■□□□□ 0.21
Ubr1O70481 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubr1O70481 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr1O70481 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC16.38■□□□□ 0.21
Ubr1O70481 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.37■□□□□ 0.21
Ubr1O70481 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.37■□□□□ 0.21
Ubr1O70481 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC16.37■□□□□ 0.21
Ubr1O70481 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ubr1O70481 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.37■□□□□ 0.21
Ubr1O70481 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.37■□□□□ 0.21
Ubr1O70481 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr1O70481 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Cd63-ps-202ENSMUST00000154992 717 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Gm25881-201ENSMUST00000157783 103 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Gm807-202ENSMUST00000224929 408 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.36■□□□□ 0.21
Ubr1O70481 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Gm12165-201ENSMUST00000117047 342 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Gm12164-201ENSMUST00000121695 551 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Gm19459-201ENSMUST00000176240 835 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16.36■□□□□ 0.21
Ubr1O70481 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.36■□□□□ 0.21
Ubr1O70481 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr1O70481 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC16.35■□□□□ 0.21
Ubr1O70481 Gm5419-201ENSMUST00000119301 527 ntBASIC16.35■□□□□ 0.21
Ubr1O70481 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.35■□□□□ 0.21
Ubr1O70481 Gm9785-201ENSMUST00000062642 1006 ntBASIC16.35■□□□□ 0.21
Ubr1O70481 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ubr1O70481 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ubr1O70481 Gm21998-201ENSMUST00000117552 1308 ntBASIC16.35■□□□□ 0.21
Ubr1O70481 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms