Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PHF1O43189 FO538757.1-201ENST00000623083 1397 ntBASIC13.86□□□□□ -0.19
PHF1O43189 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 AC010491.1-201ENST00000563101 2797 ntBASIC13.86□□□□□ -0.19
PHF1O43189 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.86□□□□□ -0.19
PHF1O43189 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PHF1O43189 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 AL592309.1-201ENST00000443127 649 ntBASIC13.86□□□□□ -0.19
PHF1O43189 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.86□□□□□ -0.19
PHF1O43189 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
PHF1O43189 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.86□□□□□ -0.19
PHF1O43189 AL512356.2-201ENST00000546955 174 ntBASIC13.86□□□□□ -0.19
PHF1O43189 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.86□□□□□ -0.19
PHF1O43189 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 AL603832.2-201ENST00000566195 2125 ntBASIC13.86□□□□□ -0.19
PHF1O43189 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.86□□□□□ -0.19
PHF1O43189 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.86□□□□□ -0.19
PHF1O43189 MIR4492-201ENST00000581627 80 ntBASIC13.86□□□□□ -0.19
PHF1O43189 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 AP002414.2-201ENST00000591780 3365 ntBASIC13.86□□□□□ -0.19
PHF1O43189 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PHF1O43189 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PHF1O43189 AC144831.1-201ENST00000573312 2656 ntBASIC13.86□□□□□ -0.19
PHF1O43189 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PHF1O43189 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 AL671710.1-201ENST00000610245 2349 ntBASIC13.85□□□□□ -0.19
PHF1O43189 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.85□□□□□ -0.19
PHF1O43189 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PHF1O43189 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PHF1O43189 TREML5P-201ENST00000421694 576 ntBASIC13.85□□□□□ -0.19
PHF1O43189 AC245100.3-201ENST00000441281 285 ntBASIC13.85□□□□□ -0.19
PHF1O43189 ATP5G2P4-201ENST00000442175 420 ntBASIC13.85□□□□□ -0.19
PHF1O43189 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.85□□□□□ -0.19
PHF1O43189 RN7SL589P-201ENST00000481268 310 ntBASIC13.85□□□□□ -0.19
PHF1O43189 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
PHF1O43189 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PHF1O43189 AC079140.1-201ENST00000508039 487 ntBASIC13.85□□□□□ -0.19
PHF1O43189 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.85□□□□□ -0.19
PHF1O43189 AC109635.5-201ENST00000533593 962 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms