Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gm19184-201ENSMUST00000196798 928 ntBASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.72□□□□□ -0.69
Tnfrsf9P20334 AC125117.2-201ENSMUST00000228344 1140 ntBASIC10.72□□□□□ -0.69
Tnfrsf9P20334 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf9P20334 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm16570-201ENSMUST00000161951 436 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm38266-201ENSMUST00000194931 421 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.71□□□□□ -0.69
Tnfrsf9P20334 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf9P20334 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf9P20334 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf9P20334 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Tnfrsf9P20334 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf9P20334 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf9P20334 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf9P20334 Gm12485-201ENSMUST00000119641 291 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms