Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm13297-201ENSMUST00000120205 934 ntBASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm7046-201ENSMUST00000221351 977 ntBASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rsph3bQ9DA80 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm6621-201ENSMUST00000193251 772 ntBASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm19931-201ENSMUST00000198920 368 ntBASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm24526-201ENSMUST00000082921 158 ntBASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rsph3bQ9DA80 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rsph3bQ9DA80 Gm32025-201ENSMUST00000217960 307 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms