Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NANOGP1Q8N7R0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AL589702.1-201ENST00000641229 1509 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ZBED1P1-201ENST00000502364 1930 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AC073621.1-201ENST00000392730 636 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 KRT18P27-201ENST00000427733 1299 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 MIR4313-201ENST00000580760 101 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ACTL9-202ENST00000612068 1252 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AC107918.4-202ENST00000641623 219 ntBASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NANOGP1Q8N7R0 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NANOGP1Q8N7R0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms