Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Gm12384-201ENSMUST00000119228 919 ntBASIC12.53□□□□□ -0.4
SynpoQ8CC35 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.53□□□□□ -0.4
SynpoQ8CC35 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Gm10478-201ENSMUST00000084451 396 ntBASIC12.53□□□□□ -0.4
SynpoQ8CC35 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.53□□□□□ -0.4
SynpoQ8CC35 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
SynpoQ8CC35 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.52□□□□□ -0.4
SynpoQ8CC35 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SynpoQ8CC35 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Gm8213-201ENSMUST00000118191 441 ntBASIC12.52□□□□□ -0.41
SynpoQ8CC35 Gm11803-201ENSMUST00000119966 444 ntBASIC12.52□□□□□ -0.41
SynpoQ8CC35 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Gm37424-201ENSMUST00000191727 561 ntBASIC12.52□□□□□ -0.41
SynpoQ8CC35 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.52□□□□□ -0.41
SynpoQ8CC35 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm13392-201ENSMUST00000117708 150 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm5687-201ENSMUST00000118252 640 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.51□□□□□ -0.41
SynpoQ8CC35 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.51□□□□□ -0.41
SynpoQ8CC35 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms