Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm26308-201ENSMUST00000157768 69 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm27618-201ENSMUST00000183671 60 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm5312-201ENSMUST00000203728 547 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm18944-201ENSMUST00000207672 643 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lsm11Q8BUV6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm23935-201ENSMUST00000102303 57 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm24270-201ENSMUST00000102326 57 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm25109-201ENSMUST00000122474 114 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm24245-201ENSMUST00000157318 57 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gm24447-201ENSMUST00000083977 338 ntBASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.11□□□□□ -0.63
Lsm11Q8BUV6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lsm11Q8BUV6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms