Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm27772-201ENSMUST00000184900 187 ntBASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ctdp1Q7TSG2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Gm43438-201ENSMUST00000198133 379 ntBASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Gm19931-201ENSMUST00000198920 368 ntBASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ctdp1Q7TSG2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm19220-201ENSMUST00000222682 803 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctdp1Q7TSG2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms