Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 AC004987.2-201ENST00000395959 1148 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 GPS2P2-201ENST00000430745 888 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 SPDYE14P-201ENST00000442619 822 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MIR6080-201ENST00000617359 66 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 AP005117.1-202ENST00000581724 1908 ntBASIC14.25□□□□□ -0.13
CSNK1A1P48729 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CSNK1A1P48729 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CSNK1A1P48729 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 SPDYE7P-202ENST00000420373 878 ntBASIC14.24□□□□□ -0.13
CSNK1A1P48729 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 PAUPAR-201ENST00000630360 2965 ntBASIC14.24□□□□□ -0.13
CSNK1A1P48729 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CSNK1A1P48729 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.24□□□□□ -0.13
CSNK1A1P48729 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms